mirror of
https://github.com/zebrajr/pytorch.git
synced 2025-12-07 00:21:07 +01:00
Summary: Memonger had a subtle bug which caused it to recycle "splitinfo" outputs of Concat/Split. That is bad since they are in CPU device, and woult cause them to be realloaced. This caused big slowdown with Kaiming's trainer. Bug was that we checked for gradients as contaning "_grad" in the name, although we should only allow it as a suffix. Admittedly, this is not elegant to do string checking anyways, but that is how Caffe2 works now. Reviewed By: asaadaldien Differential Revision: D5627251 fbshipit-source-id: c12be2323109bf81c3725d8884c7ef024e010bd5
1092 lines
38 KiB
Python
1092 lines
38 KiB
Python
## @package memonger
|
|
# Module caffe2.python.memonger
|
|
from __future__ import absolute_import
|
|
from __future__ import division
|
|
from __future__ import print_function
|
|
from __future__ import unicode_literals
|
|
|
|
import networkx as nx
|
|
import collections
|
|
import time
|
|
import heapq
|
|
import copy
|
|
from caffe2.python import workspace
|
|
from caffe2.proto import caffe2_pb2
|
|
import enum
|
|
import logging
|
|
import numpy as np
|
|
from future.utils import viewitems, viewvalues
|
|
import caffe2.python._import_c_extension as C
|
|
|
|
log = logging.getLogger("memonger")
|
|
log.setLevel(logging.INFO)
|
|
LiveRange = collections.namedtuple('LiveRange', ["defined", "used", "size"])
|
|
|
|
|
|
def share_grad_blobs(
|
|
net,
|
|
losses,
|
|
param_grads,
|
|
namescope,
|
|
dont_share_blobs=None,
|
|
share_activations=False,
|
|
blob_shapes=None,
|
|
):
|
|
'''
|
|
Implements similar optimization as Torch's shareGradInput():
|
|
for the gradients that are passed between layers, share blobs between
|
|
operators when possible. This yields significant memory savings with
|
|
deep networks.
|
|
|
|
Returns an optimized protobuf (assign to net._net)
|
|
'''
|
|
def is_grad_blob(b):
|
|
name = str(b)
|
|
# Note: need to look at _{namescope} pattern as it matches
|
|
# to handle the auto-split gradients
|
|
return name.endswith("_grad") and (name.startswith(namescope) or
|
|
name.startswith("_" + namescope)) and name not in param_grads
|
|
|
|
def is_grad_op(op):
|
|
# TODO: something smarter
|
|
for b in list(op.input) + list(op.output):
|
|
if is_grad_blob(b):
|
|
return True
|
|
return False
|
|
|
|
log.warn("NOTE: Executing memonger to optimize gradient memory")
|
|
|
|
# Collect ops that have something to do with gradients
|
|
if not namescope.endswith("/"):
|
|
namescope += "/"
|
|
|
|
netproto = copy.deepcopy(net.Proto())
|
|
activations = []
|
|
external_output = set(net.Proto().external_output)
|
|
|
|
# Hacky way to get activations, think of a better way
|
|
for op in net.Proto().op:
|
|
for b in op.output:
|
|
if b + "_w" in op.input and b not in external_output:
|
|
activations.append(b)
|
|
|
|
# Remove last activations, as they are usually accessed externally
|
|
activations = set(activations[:-2])
|
|
|
|
# Gradient ops
|
|
grad_ops = [op for op in netproto.op if is_grad_op(op)]
|
|
return _compute_blob_recycling_for_dag(
|
|
netproto,
|
|
losses,
|
|
grad_ops,
|
|
lambda b: is_grad_blob(b) or (share_activations and b in activations),
|
|
namescope,
|
|
{} if dont_share_blobs is None else dont_share_blobs,
|
|
blob_shapes
|
|
)
|
|
|
|
|
|
def optimize_inference_for_dag(net, input_blobs, namescope=""):
|
|
netproto = copy.deepcopy(net.Proto())
|
|
external_input = set(net.Proto().external_input)
|
|
external_output = set(net.Proto().external_output)
|
|
|
|
def is_activation_blob(b):
|
|
return b not in external_input and b not in external_output
|
|
|
|
seen_as_output = set()
|
|
ops = list(net.Proto().op)
|
|
|
|
# Sanity check: check that all external inputs are properlyh accounted
|
|
# and that no gradient ops are included in 'net'
|
|
for op in ops:
|
|
for b in op.input:
|
|
if is_activation_blob(b) and b not in seen_as_output:
|
|
assert False, "{} not in external input".format(b)
|
|
seen_as_output = seen_as_output.union(set(op.output))
|
|
assert not op.is_gradient_op, \
|
|
"You can only pass inference-only nets to optimize_inference_for_dag"
|
|
|
|
return _compute_blob_recycling_for_dag(
|
|
netproto, input_blobs, ops, is_activation_blob,
|
|
namescope, set(), None,
|
|
)
|
|
|
|
|
|
def _compute_blob_recycling_for_dag(
|
|
netproto, heads, ops, is_shareable,
|
|
namescope, dont_share_blobs, blob_shapes=None,
|
|
):
|
|
'''
|
|
Computes a blob recycling by traversing the computation DAG. The resulting
|
|
model can be executed safely on a DAGNet.
|
|
'''
|
|
start_time = time.time()
|
|
if dont_share_blobs is not None:
|
|
dont_share_blobs = set([str(b) for b in dont_share_blobs])
|
|
|
|
# Create mapping from blobs to ops
|
|
origproto = copy.deepcopy(netproto)
|
|
blobs_to_ops = collections.defaultdict(lambda: [])
|
|
blob_input_count = collections.defaultdict(lambda: 0)
|
|
op_inputs = collections.defaultdict(lambda: 0)
|
|
op_visit_count = collections.defaultdict(lambda: 0)
|
|
share_counts = collections.defaultdict(lambda: 0)
|
|
req_tokens = collections.defaultdict(lambda: set())
|
|
op_token_deposit = [set() for _ in ops]
|
|
|
|
blob_sizes = {} if blob_shapes is not None else None
|
|
|
|
# First figure out which of the shareable blobs
|
|
# are 'internal' to the optimization. For example, if optimizing
|
|
# only gradient ops, then activation blobs will be 'external' as they
|
|
# are not output by these ops.
|
|
optim_op_outputs = set()
|
|
for op in ops:
|
|
optim_op_outputs.update(set(op.output))
|
|
|
|
blob_seen = collections.defaultdict(lambda: 0)
|
|
for i, op in enumerate(ops):
|
|
for inp in op.input:
|
|
if is_shareable(inp) or inp in heads:
|
|
if inp in optim_op_outputs:
|
|
blobs_to_ops[inp].append(i)
|
|
assert blob_seen[inp] > 0, \
|
|
"Input {} was not output by an op before".format(inp)
|
|
op_inputs[i] += blob_seen[inp]
|
|
else:
|
|
# For external blobs, we don't increase the op_inputs
|
|
# count.
|
|
blobs_to_ops[inp].append(i)
|
|
share_counts[inp] = 1
|
|
for outp in op.output:
|
|
blob_seen[outp] += 1
|
|
|
|
output_blobs = set()
|
|
mapping = {}
|
|
unknown_shapes = set()
|
|
|
|
# Helper function to return blob size based on shape inference.
|
|
# If we don't have shape inference available, return 0.
|
|
def infer_blob_size(b):
|
|
if b in blob_shapes:
|
|
return np.prod(blob_shapes[b])
|
|
else:
|
|
unknown_shapes.add(b)
|
|
return 0
|
|
|
|
global token_seq
|
|
token_seq = 0
|
|
|
|
# Creates a next "token". Tokens are used to to keep track of
|
|
# dependendencies: a blob can be replaced by another only if that
|
|
# blob "holds" all tokens currently in scope.
|
|
def next_token():
|
|
global token_seq
|
|
token_seq += 1
|
|
return token_seq
|
|
|
|
saved_count = 0
|
|
|
|
# Main recursive function. We start recursion from the "heads" and
|
|
# only descend on an operator when all its inputs have been 'satisfied'.
|
|
# That is, all parent operators have been visited.
|
|
def descend(op_idx, free_blobs, tokens):
|
|
# Check if there are tokens left at this operator from a
|
|
# parent operator.
|
|
tokens = tokens.union(op_token_deposit[op_idx])
|
|
op_token_deposit[op_idx] = None
|
|
cur_op = ops[op_idx]
|
|
|
|
# new_free_blobs contains the blobs that we will release after
|
|
# visiting this op
|
|
new_free_blobs = set()
|
|
saved = 0
|
|
|
|
# Update the tokens assigned to blobs to be union of the
|
|
# tokens we are currently holding and the tokens already held
|
|
# by that blob.
|
|
for b in list(cur_op.input) + list(cur_op.output):
|
|
actual_blob = b if b not in mapping else mapping[b]
|
|
req_tokens[b] = req_tokens[b].union(tokens)
|
|
if actual_blob != b:
|
|
# This blob has been assigned to another (recycled) blob,
|
|
# so update the token holdings of the recycled blob.
|
|
req_tokens[actual_blob] = req_tokens[actual_blob].union(tokens)
|
|
|
|
# Check each input and increment the counters for each of the input
|
|
# blobs.
|
|
for inp in cur_op.input:
|
|
if is_shareable(inp):
|
|
blob_input_count[inp] += 1
|
|
if blob_input_count[inp] == len(blobs_to_ops[inp]):
|
|
# This input blob has been now consumed, so we
|
|
# can release it to be recycled. If it was replaced
|
|
# by another recycled blob, release the recycled blob
|
|
# instead.
|
|
actual_blob = inp if inp not in mapping else mapping[inp]
|
|
if actual_blob not in dont_share_blobs:
|
|
new_free_blobs.add(
|
|
(-share_counts[actual_blob], actual_blob),
|
|
)
|
|
|
|
def can_be_used(blob, cur_tokens):
|
|
# Do we have all required tokens, and this one
|
|
# was not released in this op?
|
|
for (_cnt, b) in new_free_blobs:
|
|
if b == blob:
|
|
return False
|
|
return len(req_tokens[blob] - cur_tokens) == 0
|
|
|
|
# Check each output to see if we see the output the first time (i.e
|
|
# it is created by this op). if it is then, we can replace it with
|
|
# a recycled blob, if available.
|
|
for outp in cur_op.output:
|
|
if is_shareable(outp):
|
|
if outp not in output_blobs:
|
|
# First seen this blob as output, can assign to a free blob
|
|
freeb = None
|
|
|
|
# We have two algorithms for choosing the blob to replace
|
|
# this one. One that uses size information and another
|
|
# that uses a priority queue that prefers blobs that are
|
|
# have been shared before.
|
|
if blob_sizes is None:
|
|
put_back = []
|
|
while len(free_blobs) > 0:
|
|
(negcnt, cand_freeb) = heapq.heappop(free_blobs)
|
|
if can_be_used(cand_freeb, tokens):
|
|
freeb = cand_freeb
|
|
break
|
|
else:
|
|
put_back.append((negcnt, cand_freeb))
|
|
for cnt, b in put_back:
|
|
heapq.heappush(free_blobs, (cnt, b))
|
|
else:
|
|
bsize = infer_blob_size(outp)
|
|
best_blob = None
|
|
best_size = -1
|
|
|
|
# Heuristic to choose the most suitably sized blob
|
|
for b in free_blobs:
|
|
if can_be_used(b, tokens):
|
|
sz = blob_sizes[b]
|
|
if sz >= best_size:
|
|
if best_size < bsize or best_size >= sz:
|
|
best_size = sz
|
|
best_blob = b
|
|
|
|
freeb = best_blob
|
|
|
|
if freeb is not None:
|
|
free_blobs.remove(freeb)
|
|
saved += bsize
|
|
|
|
# "freeb" is the blob output to be replaced with. We
|
|
# update its tokens to include the tokens being held
|
|
# now.
|
|
if freeb is not None:
|
|
req_tokens[freeb] = req_tokens[freeb].union(tokens)
|
|
mapping[outp] = freeb
|
|
share_counts[freeb] += 1
|
|
|
|
output_blobs.add(outp)
|
|
|
|
# Process blobs released during this op visit. Depending
|
|
# on whether we have blob sizes or not, we store the list
|
|
# of free blobs differently (NOTE: this should be unified).
|
|
for (cnt, nf) in new_free_blobs:
|
|
already_inserted = False
|
|
# Note: we prevent double insertion, but it can
|
|
# happen because of parallel branches. Token management
|
|
# ensures free blobs are handled correctly.
|
|
if blob_sizes is None:
|
|
for _c, b in free_blobs:
|
|
if b == nf:
|
|
already_inserted = True
|
|
if not already_inserted:
|
|
heapq.heappush(free_blobs, (cnt, nf))
|
|
else:
|
|
if nf not in blob_sizes:
|
|
blob_sizes[nf] = infer_blob_size(outp)
|
|
if nf in free_blobs:
|
|
already_inserted = True
|
|
if not already_inserted:
|
|
free_blobs.append(nf)
|
|
|
|
num_branches = 0
|
|
# Count branches
|
|
for outp in cur_op.output:
|
|
for _ in blobs_to_ops[outp]:
|
|
num_branches += 1
|
|
|
|
# Here we process each output again and see if we can descend
|
|
# down the operator graph.
|
|
for outp in cur_op.output:
|
|
for inp_op_idx in blobs_to_ops[outp]:
|
|
op_visit_count[inp_op_idx] += 1
|
|
|
|
# Descend only if we have satisfied all inputs
|
|
if op_visit_count[inp_op_idx] == op_inputs[inp_op_idx]:
|
|
assert inp_op_idx != op_idx
|
|
new_tokens = tokens
|
|
if num_branches > 1:
|
|
# Optimization
|
|
new_tokens = tokens.union(set([next_token()]))
|
|
saved_desc = descend(
|
|
inp_op_idx,
|
|
free_blobs,
|
|
new_tokens,
|
|
)
|
|
saved += saved_desc
|
|
|
|
else:
|
|
# Leave my tokens here so that they can be grabbed
|
|
# when we visit the operator (after all inputs have been
|
|
# satisfied).
|
|
if op_token_deposit[inp_op_idx] is not None:
|
|
op_token_deposit[inp_op_idx] = \
|
|
op_token_deposit[inp_op_idx].union(tokens)
|
|
|
|
return saved
|
|
|
|
# Start DFS from the heads' (losses or inputs)
|
|
for head_blob in heads:
|
|
for op_idx in blobs_to_ops[head_blob]:
|
|
if op_token_deposit[op_idx] is not None:
|
|
saved = descend(op_idx, [], set([next_token()]))
|
|
saved_count += saved
|
|
|
|
# Rename the shared blobs
|
|
shared_blobs = set(viewvalues(mapping))
|
|
renamed = {}
|
|
for j, b in enumerate(shared_blobs):
|
|
if b in optim_op_outputs:
|
|
renamed[b] = namescope + "__m{}_shared".format(j)
|
|
else:
|
|
renamed[b] = b
|
|
|
|
# Update the mapping recursively
|
|
mapping.update(renamed)
|
|
had_changes = True
|
|
while had_changes:
|
|
had_changes = False
|
|
for k, v in mapping.items():
|
|
if v in renamed and renamed[v] != v:
|
|
renamed[k] = renamed[v]
|
|
mapping[k] = renamed[k]
|
|
had_changes = True
|
|
|
|
shared_blobs = set(mapping.values())
|
|
|
|
if saved_count > 0:
|
|
log.info("Remapping {} blobs, using {} shared; saved apprx {} MB".format(
|
|
len(mapping), len(shared_blobs), int(saved_count * 4 / 1024 / 1024),
|
|
))
|
|
log.info("Could not infer sizes for: {}".format(unknown_shapes))
|
|
else:
|
|
log.info("Remapping {} blobs, using {} shared".format(
|
|
len(mapping), len(shared_blobs),
|
|
))
|
|
|
|
apply_assignments(netproto, mapping)
|
|
log.info("Memonger memory optimization took {} secs".format(
|
|
time.time() - start_time),
|
|
)
|
|
assert verify_graph_equality(origproto, netproto), \
|
|
"Memonger graph is not equal to original."
|
|
assert verify_inplace_blobs(origproto, netproto), \
|
|
"Inplace assignments differ in memonger net."
|
|
return netproto
|
|
|
|
|
|
def _find_source_nodes(g):
|
|
''' Return nodes without predecessors '''
|
|
ret = []
|
|
for cn in g:
|
|
cur_pred = g.predecessors(cn)
|
|
if not cur_pred:
|
|
ret.append(cn)
|
|
return ret
|
|
|
|
|
|
def _find_target_nodes(g):
|
|
''' Return nodes without successors '''
|
|
ret = []
|
|
for cn in g:
|
|
cur_succ = g.successors(cn)
|
|
if not cur_succ:
|
|
ret.append(cn)
|
|
return ret
|
|
|
|
|
|
def _add_single_target_ifneeded(g):
|
|
targets = _find_target_nodes(g)
|
|
assert len(targets) >= 1
|
|
if len(targets) == 1:
|
|
return g
|
|
ret = copy.deepcopy(g)
|
|
|
|
def _next_available_idx(g):
|
|
ret = -1
|
|
for cn in g:
|
|
if cn > ret:
|
|
ret = cn
|
|
ret += 1
|
|
return ret
|
|
|
|
target_node_idx = _next_available_idx(g)
|
|
ret.add_node(target_node_idx)
|
|
for cn in targets:
|
|
ret.add_edge(cn, target_node_idx)
|
|
|
|
return ret
|
|
|
|
|
|
def _get_path(pred_list, dist_list):
|
|
''' Get the path from nx.bellman_ford()'s output '''
|
|
|
|
# distances are negative
|
|
assert all(dist_list[x] <= 0 for x in dist_list)
|
|
# node with longest distance to source is the target
|
|
target = min(dist_list, key=lambda x: dist_list[x])
|
|
|
|
ret = []
|
|
cur = target
|
|
while cur is not None:
|
|
ret.append(cur)
|
|
cur = pred_list[cur]
|
|
return list(reversed(ret))
|
|
|
|
|
|
def _get_longest_paths(g, source_nodes):
|
|
''' Get the longest path for nodes in 'source_nodes'
|
|
Find with bellman_ford() by setting weight = -1
|
|
'''
|
|
|
|
ng = copy.deepcopy(g)
|
|
for u, v in ng.edges():
|
|
ng[u][v]["weight"] = -1
|
|
|
|
ret = {}
|
|
for cn in source_nodes:
|
|
pred, dist = nx.bellman_ford(ng, cn, weight="weight")
|
|
path = _get_path(pred, dist)
|
|
assert path[0] == cn
|
|
assert len(path) - 1 == -dist[path[-1]]
|
|
ret[cn] = path
|
|
|
|
return ret
|
|
|
|
|
|
def _build_tree(paths):
|
|
''' Build a tree for given paths based on common elements.
|
|
Last elements of all paths are the same, which is the root of the tree.
|
|
'''
|
|
assert all(cp[-1] == paths[0][-1] for cp in paths)
|
|
g = nx.DiGraph()
|
|
node_set = {y for x in paths for y in x}
|
|
g.add_nodes_from(node_set)
|
|
for cp in paths:
|
|
for ce in zip(cp[0:-1], cp[1:]):
|
|
g.add_edge(ce[1], ce[0])
|
|
|
|
root = paths[0][-1]
|
|
_compute_tree_height(g, root)
|
|
|
|
return (g, root)
|
|
|
|
|
|
def _compute_tree_height(g, root):
|
|
''' Compute the heights of the tree for all nodes
|
|
Height of leaves are 0
|
|
'''
|
|
def _get_height(root):
|
|
children = g.successors(root)
|
|
height = 0
|
|
if children:
|
|
child_heights = [_get_height(x) for x in children]
|
|
height = max(child_heights) + 1
|
|
g.node[root]["height"] = height
|
|
return height
|
|
|
|
_get_height(root)
|
|
|
|
|
|
def _sort_tree_leaves(g, root):
|
|
''' For each node, sort its child nodes based on the height of the nodes.
|
|
Return the leaf nodes of the tree after sorting.
|
|
'''
|
|
def _get_height(root):
|
|
return g.node[root]["height"]
|
|
|
|
def _get_sorted_leaves(root):
|
|
children = g.successors(root)
|
|
if not children:
|
|
return [root]
|
|
child_heights = [_get_height(x) for x in children]
|
|
order = sorted(range(len(children)), key=lambda x: child_heights[x])
|
|
ret = []
|
|
for co in order:
|
|
cr = children[co]
|
|
ret += _get_sorted_leaves(cr)
|
|
|
|
return ret
|
|
|
|
return _get_sorted_leaves(root)
|
|
|
|
|
|
def topological_sort_traversal_longest_path(g):
|
|
''' The graph 'g' may contain several source nodes (nodes without incoming
|
|
edge), which could be in any order and still be a valid
|
|
topological sorting result. We would like to arrange these source nodes
|
|
so that the average live spans of the computed blobs are shorter.
|
|
The idea is to sort the source nodes based on the length of their path to
|
|
the target node so that the one with longer path is used first.
|
|
This is done by:
|
|
- Add a single target node if there are multiple target nodes in 'g'.
|
|
- Find the longest path between each source and the target node.
|
|
- Convert the longest paths to a tree with the target node being the root
|
|
and source nodes being the leaves.
|
|
- Sort the nodes of the tree based on the height of the tree.
|
|
'''
|
|
gt = _add_single_target_ifneeded(g)
|
|
source_nodes = _find_source_nodes(gt)
|
|
lpaths = _get_longest_paths(gt, source_nodes)
|
|
tree, root = _build_tree(list(viewvalues(lpaths)))
|
|
sorted_sources = _sort_tree_leaves(tree, root)
|
|
assert(sorted(sorted_sources) == sorted(source_nodes))
|
|
|
|
ret = nx.topological_sort(g, sorted_sources)
|
|
assert(len(ret) == len(g.node))
|
|
return ret
|
|
|
|
|
|
def topological_sort_traversal(g):
|
|
return nx.topological_sort(g)
|
|
|
|
|
|
def compute_ranges(linearized_ops, blob_sizes=None):
|
|
if not blob_sizes:
|
|
log.warning('Provide blob sizes to get more accurate assignments.')
|
|
|
|
blobs = collections.defaultdict(
|
|
lambda: LiveRange(defined=None, used=None, size=None))
|
|
for i, op in enumerate(linearized_ops):
|
|
for blob in op.input:
|
|
used = blobs[blob].used
|
|
if used is None:
|
|
used = i
|
|
else:
|
|
used = max(used, i)
|
|
blobs[blob] = blobs[blob]._replace(used=used)
|
|
blob_size = blob_sizes[blob] if blob_sizes else None
|
|
assert not blob_sizes or blob_size is not None
|
|
blobs[blob] = blobs[blob]._replace(size=blob_size)
|
|
for blob in op.output:
|
|
defined = blobs[blob].defined
|
|
if defined is None:
|
|
defined = i
|
|
else:
|
|
defined = min(defined, i)
|
|
blobs[blob] = blobs[blob]._replace(defined=defined)
|
|
blob_size = blob_sizes[blob] if blob_sizes else None
|
|
assert not blob_sizes or blob_size is not None
|
|
blobs[blob] = blobs[blob]._replace(size=blob_size)
|
|
|
|
return blobs
|
|
|
|
|
|
def is_compatible(candidate_range, assignment, static_blobs):
|
|
(name, range_) = assignment[-1]
|
|
if name in static_blobs:
|
|
return False
|
|
if candidate_range.defined is None or range_.defined is None \
|
|
or range_.used is None:
|
|
return False
|
|
return candidate_range.defined > range_.used
|
|
|
|
|
|
def compute_blob_assignments(assignments):
|
|
blob_assignments = {}
|
|
for assignment in assignments:
|
|
if len(assignment) == 1:
|
|
continue
|
|
last_blob, _ = assignment[-1]
|
|
for (blob, _) in assignment:
|
|
blob_assignments[blob] = last_blob
|
|
return blob_assignments
|
|
|
|
|
|
def _get_max_size(assignment):
|
|
if not assignment:
|
|
return 0
|
|
ret = max([x[1].size for x in assignment])
|
|
ret = 0 if ret is None else ret
|
|
return ret
|
|
|
|
|
|
def get_memory_usage(assignments):
|
|
ret = 0
|
|
for cur in assignments:
|
|
ret += _get_max_size(cur)
|
|
return ret
|
|
|
|
|
|
def compute_assignments_greedy(ranges_sorted, init_assignments=None):
|
|
assignments = init_assignments or []
|
|
visited = {y[0] for x in assignments for y in x}
|
|
|
|
for (name, range_) in ranges_sorted:
|
|
if name in visited:
|
|
continue
|
|
assigned = False
|
|
best_assignment = 0
|
|
min_dist = float("inf")
|
|
candidate_size = range_.size or 0
|
|
for idx, assignment in enumerate(assignments):
|
|
if is_compatible(range_, assignment, []):
|
|
assigned = True
|
|
dist = abs(_get_max_size(assignment) - candidate_size)
|
|
if dist < min_dist:
|
|
min_dist = dist
|
|
best_assignment = idx
|
|
if assigned:
|
|
assignment = assignments[best_assignment]
|
|
assignment.append((name, range_))
|
|
else:
|
|
assignments.append([(name, range_)])
|
|
return assignments
|
|
|
|
|
|
def _get_count(assignments):
|
|
''' Return number of blobs in assignments '''
|
|
if assignments:
|
|
return sum([len(x) for x in assignments])
|
|
return 0
|
|
|
|
|
|
def compute_assignments_dp(ranges_sorted, init_assignment, counter=None):
|
|
''' Compute assignment for blobs in 'ranges_sorted' on top of 'init_assignment'
|
|
using dynamic programming + recursion.
|
|
|
|
ranges_sorted: blobs sorted by 'used'
|
|
init_assignment: assignment to start with, blobs in 'ranges_sorted' should
|
|
not be used in 'init_assignment'
|
|
|
|
Using f(b, k, init) to represent the best assignment for blobs b[0:k]
|
|
given initial assignment 'init', we have
|
|
f(b, k, init) = f(b, j, init) +
|
|
find_best(b[j:k], f(b, j, init))
|
|
where j is the index of the last best assignment that is independent of
|
|
blob b[k - 1] (b[k - 1] is compatible with all assignments in
|
|
f(b, j, init)), and find_best(b1, init1) gives the best assignment
|
|
for blobs in 'b1' based on the initial assignment 'init1', and blobs
|
|
b1[0:-1] should be incompatible with b1[-1]. f(b, len(b), []) gives
|
|
the best assignment for blobs 'b'.
|
|
|
|
For find_best(b, init), since b[0:-1] are not compatible with b[-1], we
|
|
could reduce it to a smaller problem to find best assignment for b[0:-1]
|
|
as
|
|
find_best(b, init) = min {
|
|
f(b[0:-1], len(b) - 1, init - x) + [x, b[-1]] for x in init, or
|
|
f(b[0:-1], len(b) - 1, init) + [b[-1]]
|
|
}
|
|
where min{} gives the assignment with minimum memory usage.
|
|
'''
|
|
|
|
def _get_compatible_prev(candidate_range, best_assignments, cur_idx):
|
|
''' Find closest position k of best_assignments that is independent of
|
|
candidate_range that candiate_range is compatible with all assignments
|
|
in best_assignments[k].
|
|
Return -1 if not found.
|
|
'''
|
|
def is_compatible_all(candidate_range, assignments):
|
|
''' return true if compatiable for all assignments in assignments '''
|
|
return all([is_compatible(candidate_range[1], x, []) for x in assignments])
|
|
|
|
ii = cur_idx - 1
|
|
while ii >= 0:
|
|
cba = best_assignments[ii]
|
|
if is_compatible_all(candidate_range, cba):
|
|
return ii
|
|
ii -= 1
|
|
return -1
|
|
|
|
def _find_best(ranges, init_assignment, prev_best_assignment, counter):
|
|
''' Find the best assignment for blobs 'ranges' given an initialized
|
|
assignment 'init_assignment'.
|
|
|
|
Blobs in ranges[0:-1] should be incompatible with blob range[-1].
|
|
'prev_best_assignment': best assignment for blobs in ranges[:-1]
|
|
|
|
By assigning ranges[-1] to each assignment k in 'init_assignment' or
|
|
in a new assignment, the problem becomes a smaller problem to find
|
|
the best assignment for ranges[0:-1] given the initial assignment
|
|
init_assigment[0:k, (k+1):-1].
|
|
'''
|
|
# Blob to check
|
|
find_range = ranges[-1]
|
|
# Blobs in ranges[0:-1] are incompatible with ranges[-1] so that we can
|
|
# reduce it to a smaller problem.
|
|
assert all(not is_compatible(x[1], [find_range], []) for x in ranges[0:-1])
|
|
|
|
sz = len(init_assignment)
|
|
best_candidates = []
|
|
# Try to assign 'find_range' to each assignment in init_assignment
|
|
for ii in range(sz):
|
|
if not is_compatible(find_range[1], init_assignment[ii], []):
|
|
continue
|
|
cur_best = copy.deepcopy(init_assignment)
|
|
cur_best[ii].append(find_range)
|
|
if len(ranges) > 1:
|
|
cur_best_tmp = [x for i, x in enumerate(cur_best) if i != ii]
|
|
# reduce to a smaller dp problem
|
|
cur_best_tmp = compute_assignments_dp(
|
|
ranges[:-1], cur_best_tmp, counter)
|
|
cur_best = cur_best_tmp + [cur_best[ii]]
|
|
best_candidates.append(cur_best)
|
|
# Try to put 'find_range' in a new assignment
|
|
best_candidates.append(prev_best_assignment + [[find_range]])
|
|
|
|
ret = min(best_candidates, key=lambda x: get_memory_usage(x))
|
|
return ret
|
|
|
|
if not counter:
|
|
counter = [0]
|
|
counter[0] += 1
|
|
|
|
if counter and counter[0] % 5000 == 0:
|
|
rs = [ranges_sorted[0][1].defined, ranges_sorted[-1][1].used]
|
|
log.info('Finding assignments {} ({} -> {})...'.format(
|
|
counter[0], rs[0], rs[1]))
|
|
|
|
init_assignment = init_assignment or []
|
|
# best_assignments[k]: best assignments for first k blobs ranges_sorted[0:(k+1)]
|
|
best_assignments = []
|
|
# Find best assignment for blobs ranges_sorted[0:ii]
|
|
for ii, cur_range in enumerate(ranges_sorted):
|
|
# closest best_assignment that is independent of ranges_sorted[ii]
|
|
prev_idx = _get_compatible_prev(cur_range, best_assignments, ii)
|
|
prev_best = copy.deepcopy(init_assignment) if prev_idx < 0 else \
|
|
copy.deepcopy(best_assignments[prev_idx])
|
|
# Need to find best assignment for blobs in 'ranges_part'
|
|
ranges_part = ranges_sorted[(prev_idx + 1):(ii + 1)]
|
|
cur_best = _find_best(
|
|
ranges_part, prev_best,
|
|
best_assignments[-1] if best_assignments else init_assignment,
|
|
counter)
|
|
assert _get_count(cur_best) == _get_count(prev_best) + len(ranges_part)
|
|
best_assignments.append(copy.deepcopy(cur_best))
|
|
|
|
assert len(best_assignments) == len(ranges_sorted)
|
|
|
|
best = best_assignments[-1]
|
|
|
|
return best
|
|
|
|
|
|
def get_updated_ranges(ranges, max_live=None):
|
|
''' Set LiveRange.defined = -1 if it is None
|
|
Set LiveRange.used = max_live if it is None
|
|
Set LiveRanee.size = 1 if it is None
|
|
'''
|
|
|
|
def _get_max_live(ranges):
|
|
max_live = max(x[1].used for x in ranges if x[1].used) + 1
|
|
return max_live
|
|
|
|
def _update_range(x, max_live, size):
|
|
cx = x
|
|
if x[1].defined is None:
|
|
cx = (cx[0], cx[1]._replace(defined=-1))
|
|
if x[1].used is None:
|
|
cx = (cx[0], cx[1]._replace(used=max_live))
|
|
if x[1].size is None:
|
|
cx = (cx[0], cx[1]._replace(size=size))
|
|
return cx
|
|
|
|
if max_live is None:
|
|
max_live = _get_max_live(ranges)
|
|
ranges = [_update_range(x, max_live, 1) for x in ranges]
|
|
|
|
return ranges
|
|
|
|
|
|
def compute_assignments(ranges, static_blobs, algo):
|
|
'''
|
|
algo: Method used to find assignments (AssignmentAlgorithm.GREEDY or
|
|
AssignmentAlgorithm.DYNAMIC_PROGRAMMING).
|
|
AssignmentAlgorithm.DYNAMIC_PROGRAMMING gives optimal solution at the
|
|
cost of more computation.
|
|
AssignmentAlgorithm.GREEDY may be better in the case 'blob_sizes' is
|
|
not provided.
|
|
'''
|
|
|
|
# Sort the ranges based on when they are last used.
|
|
# If LiveRange.used is None, then the blob is never used and could
|
|
# be consumed externally. Sort these to the end of the list as opposed
|
|
# to the beginning so that they can be shared as well.
|
|
ranges = sorted(
|
|
viewitems(ranges),
|
|
key=lambda p: (p[1].used is None, p[1].used),
|
|
)
|
|
# Update None values
|
|
ranges = get_updated_ranges(ranges)
|
|
|
|
# Sharable blobs
|
|
ranges_sharable = [x for x in ranges if x[0] not in static_blobs]
|
|
# Static blobs, not sharable
|
|
ranges_static = [x for x in ranges if x[0] in static_blobs]
|
|
|
|
log.info("Total sharable blobs {}".format(len(ranges_sharable)))
|
|
|
|
best_assignment = []
|
|
if algo == AssignmentAlgorithm.DYNAMIC_PROGRAMMING:
|
|
best_assignment = compute_assignments_dp(ranges_sharable, [])
|
|
elif algo == AssignmentAlgorithm.GREEDY:
|
|
best_assignment = compute_assignments_greedy(ranges_sharable, [])
|
|
else:
|
|
assert "Invalid algo name {}".format(algo)
|
|
best_assignment += [[x] for x in ranges_static]
|
|
|
|
# verify_assignments(best_assignment)
|
|
|
|
return best_assignment
|
|
|
|
|
|
def verify_assignments(assignments):
|
|
for cur in assignments:
|
|
for x, y in zip(cur[0:-1], cur[1:]):
|
|
assert x[1].used < y[1].defined
|
|
|
|
|
|
def compute_interference_graph(ops):
|
|
g = nx.DiGraph()
|
|
for i, op in enumerate(ops):
|
|
g.add_node(i, op=op)
|
|
for i, parent_op in enumerate(ops):
|
|
for j, child_op in enumerate(ops):
|
|
if i >= j:
|
|
continue
|
|
if any(output in child_op.input for output in parent_op.output):
|
|
deps = set(child_op.input).intersection(parent_op.output)
|
|
g.add_edge(i, j, deps=deps)
|
|
assert nx.is_directed_acyclic_graph(g), child_op
|
|
return g
|
|
|
|
|
|
Optimization = collections.namedtuple(
|
|
'Optimization', ['net', 'assignments', 'blob_assignments'])
|
|
|
|
|
|
def apply_assignments(net, blob_assignments):
|
|
def canonical_name(blob):
|
|
if blob not in blob_assignments:
|
|
return blob
|
|
return blob_assignments[blob]
|
|
|
|
for op in net.op:
|
|
# Descend into subnets of the recurrent network
|
|
if op.type.startswith('RecurrentNetwork'):
|
|
apply_recurrent_blob_assignments(op, blob_assignments, canonical_name)
|
|
|
|
for i, input_ in enumerate(op.input):
|
|
op.input[i] = canonical_name(input_)
|
|
for i, output in enumerate(op.output):
|
|
op.output[i] = canonical_name(output)
|
|
|
|
|
|
|
|
def apply_recurrent_blob_assignments(op, blob_assignments, canonical_name):
|
|
log.debug("Applying assignments to recurrent op: {}".format(op.type))
|
|
import google.protobuf.text_format as protobuftx
|
|
step_args = [a for a in op.arg if a.name.endswith("step_net")]
|
|
for step_arg in step_args:
|
|
step_proto = caffe2_pb2.NetDef()
|
|
protobuftx.Merge(step_arg.s.decode("ascii"), step_proto)
|
|
apply_assignments(step_proto, blob_assignments)
|
|
for i, einp in enumerate(step_proto.external_input):
|
|
if einp in blob_assignments:
|
|
step_proto.external_input[i] = canonical_name(einp)
|
|
step_arg.s = str(step_proto).encode("ascii")
|
|
# Store renamings
|
|
for blob, renamed in viewitems(blob_assignments):
|
|
if blob in list(op.input) + list(op.output):
|
|
a = caffe2_pb2.Argument()
|
|
a.name = blob + ".rename"
|
|
a.s = str(renamed).encode("ascii")
|
|
op.arg.extend([a])
|
|
|
|
|
|
class AssignmentAlgorithm(enum.Enum):
|
|
GREEDY = 0
|
|
DYNAMIC_PROGRAMMING = 1
|
|
|
|
|
|
def optimize_inference_fast(net, static_blobs):
|
|
optim = caffe2_pb2.NetDef()
|
|
optim_str = C.memonger_optimize_inference_net(
|
|
net.SerializeToString(), [str(s).encode('utf-8') for s in static_blobs]
|
|
)
|
|
optim.ParseFromString(optim_str)
|
|
return optim
|
|
|
|
|
|
def optimize_interference(net, static_blobs,
|
|
ordering_function=topological_sort_traversal,
|
|
blob_sizes=None,
|
|
algo=AssignmentAlgorithm.GREEDY):
|
|
"""
|
|
ordering_function: topological_sort_traversal or
|
|
topological_sort_traversal_longest_path.
|
|
topological_sort_traversal_longest_path gives better
|
|
results but needs a bit more computation.
|
|
algo: Method used to find assignments (AssignmentAlgorithm.GREEDY or
|
|
AssignmentAlgorithm.DYNAMIC_PROGRAMMING).
|
|
AssignmentAlgorithm.DYNAMIC_PROGRAMMING gives optimal solution at the
|
|
cost of more computation.
|
|
AssignmentAlgorithm.GREEDY may be better in the case 'blob_sizes' is
|
|
not provided.
|
|
"""
|
|
|
|
"""
|
|
1) Use a BFS traversal of the execution graph to generate an
|
|
ordering of the node executions.
|
|
2) Generate use-def ranges for each `blob` in the BFS traversal
|
|
order.
|
|
3) Assign blobs to `canonical blobs`
|
|
4) Rename blobs to canonical blobs
|
|
"""
|
|
|
|
net = copy.deepcopy(net)
|
|
g = compute_interference_graph(net.op)
|
|
ordering = ordering_function(g)
|
|
linearized_ops = [net.op[i] for i in ordering]
|
|
|
|
# Reorder ops in net based on the computed linearlized order.
|
|
# If the graph has multiple topological orderings and if the NetDef's
|
|
# ordering differs from the order used to compute ranges, then the
|
|
# runtime might end up overwriting blobs before they are used.
|
|
del net.op[:]
|
|
net.op.extend(linearized_ops)
|
|
|
|
ranges = compute_ranges(linearized_ops, blob_sizes)
|
|
assignments = compute_assignments(ranges, static_blobs, algo)
|
|
blob_assignments = compute_blob_assignments(assignments)
|
|
apply_assignments(net, blob_assignments)
|
|
return Optimization(
|
|
net=net,
|
|
blob_assignments=blob_assignments,
|
|
assignments=assignments)
|
|
|
|
|
|
def verify_inplace_blobs(net_a, net_b):
|
|
"""
|
|
Verifies that net_a and net_b have the same in-place blob assignments.
|
|
Particularly, that memonger did not add an in-place assignment when that
|
|
did not exist before.
|
|
"""
|
|
def get_inplaces(op):
|
|
out = list(op.output)
|
|
inplaces = []
|
|
for j, inp in enumerate(op.input):
|
|
if inp in out:
|
|
inplaces.append([j, out.index(inp)])
|
|
return inplaces
|
|
|
|
for op_a, op_b in zip(net_a.op, net_b.op):
|
|
if op_a.type != op_b.type:
|
|
return False
|
|
if get_inplaces(op_a) != get_inplaces(op_b):
|
|
return False
|
|
return True
|
|
|
|
|
|
def verify_graph_equality(net_a, net_b):
|
|
"""
|
|
Determines if the execution of two graphs are identical.
|
|
That is, all inputs blobs are mapped to the same output blobs
|
|
for each operator in their respective positions.
|
|
|
|
This is meant to check the output of memonger with the original graph.
|
|
It assumes that the nets have same external input and output.
|
|
|
|
O(E) runtime + O(1) amortized cost to hash for python dict
|
|
"""
|
|
|
|
def parent_list(ops):
|
|
parent_list = [[] for _ in ops]
|
|
edge_owner = {}
|
|
for i, op in enumerate(ops):
|
|
for blob in op.input:
|
|
parent_id = edge_owner.get(blob)
|
|
if parent_id is not None:
|
|
parent_list[i].append(parent_id)
|
|
for blob in op.output:
|
|
edge_owner[blob] = i
|
|
|
|
return parent_list
|
|
|
|
# Operator wise equality checks
|
|
if (len(net_a.op) != len(net_b.op)):
|
|
return False
|
|
for op_a, op_b in zip(net_a.op, net_b.op):
|
|
if (op_a.type != op_b.type or
|
|
op_a.device_option != op_b.device_option or
|
|
op_a.engine != op_b.engine):
|
|
return False
|
|
|
|
# Print debug info
|
|
parent_list_a = parent_list(net_a.op)
|
|
parent_list_b = parent_list(net_b.op)
|
|
if parent_list_a != parent_list_b:
|
|
j = 0
|
|
for a, b in zip(parent_list_a, parent_list_b):
|
|
if a != b:
|
|
print("Difference {} vs {} \n {}".format(
|
|
j, net_a.op[j], net_b.op[j]))
|
|
print("Parents: {} vs {}".format(a, b))
|
|
|
|
j += 1
|
|
|
|
# Net wise equality check
|
|
return parent_list_a == parent_list_b
|
|
|
|
|
|
Statistics = collections.namedtuple(
|
|
'Statistics', ['baseline_nbytes', 'optimized_nbytes'])
|
|
|
|
|
|
def blob_nbytes(blob):
|
|
sz = 0
|
|
try:
|
|
sz = workspace.FetchBlob(blob).nbytes
|
|
except Exception:
|
|
log.warning('Error when fetching blob {}'.format(blob))
|
|
return sz
|
|
|
|
|
|
def compute_statistics(assignments):
|
|
blob_bytes = {
|
|
blob: blob_nbytes(blob) for assignment in assignments
|
|
for (blob, _) in assignment}
|
|
baseline_nbytes = sum(viewvalues(blob_bytes))
|
|
optimized_nbytes = sum(
|
|
max(blob_bytes[blob] for (blob, _) in assignment)
|
|
for assignment in assignments)
|
|
return Statistics(
|
|
baseline_nbytes=baseline_nbytes,
|
|
optimized_nbytes=optimized_nbytes)
|
|
|
|
|
|
def collect_blob_sizes(net):
|
|
blobs = {}
|
|
for op in net.op:
|
|
for blob in op.input:
|
|
blobs[blob] = blob_nbytes(blob)
|
|
for blob in op.output:
|
|
blobs[blob] = blob_nbytes(blob)
|
|
|
|
return blobs
|