Fixes#10536
Reattempt of #61467. Thank you so much to @mskoh52 for your excellent work!
As I was trying to create a more efficient LLM data collator, I realized that `pad_sequence` only supports right padding, even though left padding is a very common format for LLMs, like Llama and Mistral.
The proposed alternative implementation was to use multiple flips, which tends to be 1.5x-2x slower. Instead we can add a [`padding_side` parameter as there is for for Hugging Face tokenizers](9d6c0641c4/src/transformers/tokenization_utils_base.py (L1565)), which requires only a very small change in the C++ code.
Here are the benchmarks of the new implementation!
`float32`:
`bool`:
Code:
```python
from __future__ import annotations
import random
import time
from typing import Literal
import numpy as np
import torch
def pad_sequence_with_flips(
sequences: list[torch.Tensor],
batch_first: bool = False,
padding_value: int | float | bool = 0.0,
padding_side: Literal["left", "right"] | str = "left",
) -> torch.Tensor:
if padding_side == 'right':
padded_sequence = torch._C._nn.pad_sequence([t.flatten() for t in sequences], batch_first=batch_first, padding_value=padding_value)
elif padding_side=='left':
padded_sequence = torch._C._nn.pad_sequence([t.flatten().flip(0) for t in sequences], batch_first=batch_first, padding_value=padding_value) # pyright: ignore[reportArgumentType]
padded_sequence = padded_sequence.flip(int(batch_first))
else:
raise ValueError(f"padding_side should be either 'right' or 'left', but got {padding_side}")
return padded_sequence
sequence_lengths: list[int] = []
flip_left_pad_times: list[float] = []
flip_left_pad_times_std: list[float] = []
left_pad_times: list[float] = []
left_pad_times_std: list[float] = []
RUNS_PER_LOOP: int = 100
for i in range(1, 7):
sequence_length = i * int(1e6) // 6
sequence_lengths.append(sequence_length)
sequences = [torch.randint(0, 2, (random.randint(1, sequence_length),), dtype=torch.bool) for _ in range(64)]
inner_left_pad_times: list[float] = []
inner_right_pad_times: list[float] = []
inner_flip_left_pad_times: list[float] = []
inner_flip_right_pad_times: list[float] = []
for _ in range(RUNS_PER_LOOP):
start = time.perf_counter()
torch._C._nn.pad_sequence(sequences, batch_first=True, padding_value=False, padding_side="left")
end = time.perf_counter()
inner_left_pad_times.append(end - start)
start = time.perf_counter()
pad_sequence_with_flips(sequences, batch_first=True, padding_value=False, padding_side="left")
end = time.perf_counter()
inner_flip_left_pad_times.append(end - start)
left_pad_times.append(sum(inner_left_pad_times) / len(inner_left_pad_times))
left_pad_times_std.append(np.std(inner_left_pad_times))
flip_left_pad_times.append(sum(inner_flip_left_pad_times) / len(inner_flip_left_pad_times))
flip_left_pad_times_std.append(np.std(inner_flip_left_pad_times))
print(f"Sequence Length: {sequence_length}, Left Pad Time: {left_pad_times[-1]}, Left with Flips Pad Time: {flip_left_pad_times[-1]}")
import matplotlib.pyplot as plt
plt.plot(sequence_lengths, left_pad_times, label="new pad_sequence left")
plt.scatter(sequence_lengths, left_pad_times)
plt.errorbar(sequence_lengths, left_pad_times, yerr=left_pad_times_std, linestyle='None', marker='^')
plt.plot(sequence_lengths, flip_left_pad_times, label="old pad_sequence left (2 flips)")
plt.scatter(sequence_lengths, flip_left_pad_times)
plt.errorbar(sequence_lengths, flip_left_pad_times, yerr=flip_left_pad_times_std, linestyle='None', marker='^')
plt.xlabel("Sequence Length")
plt.ylabel("Time (s)")
plt.legend(loc="upper right")
# Sequence Length: 166666, Left Pad Time: 0.06147645162009212, Left with Flips Pad Time: 0.09842291727001794
# Sequence Length: 333333, Left Pad Time: 0.08933195920990329, Left with Flips Pad Time: 0.15597836187991562
# Sequence Length: 500000, Left Pad Time: 0.08863158334006585, Left with Flips Pad Time: 0.15224887342999863
# Sequence Length: 666666, Left Pad Time: 0.10524682551997103, Left with Flips Pad Time: 0.18177212480995877
# Sequence Length: 833333, Left Pad Time: 0.11801802741003485, Left with Flips Pad Time: 0.20821274195001024
# Sequence Length: 1000000, Left Pad Time: 0.131894061660023, Left with Flips Pad Time: 0.23223503091008751
```
Co-authored-by: mskoh52 <mskoh52@users.noreply.github.com>
Pull Request resolved: https://github.com/pytorch/pytorch/pull/131884
Approved by: https://github.com/ezyang
Summary:
Pull Request resolved: https://github.com/pytorch/pytorch/pull/69394
Modified loops in files under fbsource/fbcode/caffe2/ from the format
```
for(TYPE var=x0;var<x_max;x++)
```
to the format
```
for(const auto var: irange(xmax))
```
This was achieved by running r-barnes's loop upgrader script (D28874212) with some modification to exclude all files under /torch/jit and a number of reversions or unused variable suppression warnings added by hand.
Test Plan: Sandcastle
Reviewed By: malfet
Differential Revision: D32837991
fbshipit-source-id: fc7c4f76d2f32a17a0faf329294b3fe7cb81df32
Summary:
Pull Request resolved: https://github.com/pytorch/pytorch/pull/66743
Modified loops in files under fbsource/fbcode/caffe2/ from the format
`for(TYPE var=x0;var<x_max;x++)`
to the format
`for(const auto var: irange(xmax))`
This was achieved by running r-barnes's loop upgrader script (D28874212) with some modification to exclude all files under /torch/jit and a number of reversions or unused variable suppression warnings added by hand.
Test Plan: Sandcastle
Reviewed By: malfet
Differential Revision: D31705359
fbshipit-source-id: c9ea2fbc0f9cd29e97a52dcb203addc5f2abb09b
Summary:
Pull Request resolved: https://github.com/pytorch/pytorch/pull/66234
Modified loops in files under fbsource/fbcode/caffe2/ from the format
`for(TYPE var=x0;var<x_max;x++)`
to the format
`for(const auto var: irange(xmax))`
This was achieved by running r-barnes's loop upgrader script (D28874212) with some modification to exclude all files under /torch/jit and a number of reversions or unused variable suppression warnings added by hand.
bypass_size_limit
allow-large-files
Test Plan: Sandcastle
Reviewed By: ngimel
Differential Revision: D30652629
fbshipit-source-id: 0ae6c4bbbb554bad42e372792a6430e1acf15e3e
Summary:
As GoogleTest `TEST` macro is non-compliant with it as well as `DEFINE_DISPATCH`
All changes but the ones to `.clang-tidy` are generated using following script:
```
for i in `find . -type f -iname "*.c*" -or -iname "*.h"|xargs grep cppcoreguidelines-avoid-non-const-global-variables|cut -f1 -d:|sort|uniq`; do sed -i "/\/\/ NOLINTNEXTLINE(cppcoreguidelines-avoid-non-const-global-variables)/d" $i; done
```
Pull Request resolved: https://github.com/pytorch/pytorch/pull/62008
Reviewed By: driazati, r-barnes
Differential Revision: D29838584
Pulled By: malfet
fbshipit-source-id: 1b2f8602c945bd4ce50a9bfdd204755556e31d13
Summary:
This is an automatic change generated by the following script:
```
#!/usr/bin/env python3
from subprocess import check_output, check_call
import os
def get_compiled_files_list():
import json
with open("build/compile_commands.json") as f:
data = json.load(f)
files = [os.path.relpath(node['file']) for node in data]
for idx, fname in enumerate(files):
if fname.startswith('build/') and fname.endswith('.DEFAULT.cpp'):
files[idx] = fname[len('build/'):-len('.DEFAULT.cpp')]
return files
def run_clang_tidy(fname):
check_call(["python3", "tools/clang_tidy.py", "-c", "build", "-x", fname,"-s"])
changes = check_output(["git", "ls-files", "-m"])
if len(changes) == 0:
return
check_call(["git", "commit","--all", "-m", f"NOLINT stubs for {fname}"])
def main():
git_files = check_output(["git", "ls-files"]).decode("ascii").split("\n")
compiled_files = get_compiled_files_list()
for idx, fname in enumerate(git_files):
if fname not in compiled_files:
continue
if fname.startswith("caffe2/contrib/aten/"):
continue
print(f"[{idx}/{len(git_files)}] Processing {fname}")
run_clang_tidy(fname)
if __name__ == "__main__":
main()
```
Pull Request resolved: https://github.com/pytorch/pytorch/pull/56892
Reviewed By: H-Huang
Differential Revision: D27991944
Pulled By: malfet
fbshipit-source-id: 5415e1eb2c1b34319a4f03024bfaa087007d7179
Summary:
Non-backwards-compatible change introduced in https://github.com/pytorch/pytorch/pull/53843 is tripping up a lot of code. Better to set it to False initially and then potentially flip to True in the later version to give people time to adapt.
Pull Request resolved: https://github.com/pytorch/pytorch/pull/55169
Reviewed By: mruberry
Differential Revision: D27511150
Pulled By: jbschlosser
fbshipit-source-id: 1ac018557c0900b31995c29f04aea060a27bc525
Summary:
**BC-breaking note**: This change throws errors for cases that used to silently pass. The old behavior can be obtained by setting `error_if_nonfinite=False`
Fixes https://github.com/pytorch/pytorch/issues/46849
Pull Request resolved: https://github.com/pytorch/pytorch/pull/53843
Reviewed By: malfet
Differential Revision: D27291838
Pulled By: jbschlosser
fbshipit-source-id: 216d191b26e1b5919a44a3af5cde6f35baf825c4
Summary:
Context: https://github.com/pytorch/pytorch/pull/53299#discussion_r587882857
These are the only hand-written parts of this diff:
- the addition to `.github/workflows/lint.yml`
- the file endings changed in these four files (to appease FB-internal land-blocking lints):
- `GLOSSARY.md`
- `aten/src/ATen/core/op_registration/README.md`
- `scripts/README.md`
- `torch/csrc/jit/codegen/fuser/README.md`
The rest was generated by running this command (on macOS):
```
git grep -I -l ' $' -- . ':(exclude)**/contrib/**' ':(exclude)third_party' | xargs gsed -i 's/ *$//'
```
I looked over the auto-generated changes and didn't see anything that looked problematic.
Pull Request resolved: https://github.com/pytorch/pytorch/pull/53406
Test Plan:
This run (after adding the lint but before removing existing trailing spaces) failed:
- https://github.com/pytorch/pytorch/runs/2043032377
This run (on the tip of this PR) succeeded:
- https://github.com/pytorch/pytorch/runs/2043296348
Reviewed By: walterddr, seemethere
Differential Revision: D26856620
Pulled By: samestep
fbshipit-source-id: 3f0de7f7c2e4b0f1c089eac9b5085a58dd7e0d97
Summary:
Update the API to access grad in cpp to avoid unexpected thread safety issues.
In particular, with the current API, a check like `t.grad().defined()` is not thread safe.
- This introduces `t.mutable_grad()` that should be used when getting a mutable version of the saved gradient. This function is **not** thread safe.
- The `Tensor& grad()` API is now removed. We could not do a deprecation cycle as most of our call side use non-const Tensors that use the non-const overload. This would lead to most calls hitting the warning. This would be too verbose for all the users.
Pull Request resolved: https://github.com/pytorch/pytorch/pull/40887
Reviewed By: ezyang
Differential Revision: D22343932
Pulled By: albanD
fbshipit-source-id: d5eb909bb743bc20caaf2098196e18ca4110c5d2
Summary:
Fixes https://github.com/pytorch/pytorch/issues/38716, fixes https://github.com/pytorch/pytorch/issues/37234
This algorithm does the summation along a single axis with multiple "levels" of accumulator, each of which is designed to hold the sum of an order of magnitude more values than the previous.
e.g. if there are 2^16 elements, the first level will hold the sum of 2^4 elements, and so on in increasing powers of 2: 2^4, 2^8, 2^12 and finally 2^16.
This limits the differences in magnitude of the partial results being added together, and so we don't lose accuracy as the axis length increases.
WIP to write a vectorized version.
Pull Request resolved: https://github.com/pytorch/pytorch/pull/39516
Reviewed By: ezyang
Differential Revision: D22106251
Pulled By: ngimel
fbshipit-source-id: b56de4773292439dbda62b91f44ff37715850ae9
Summary:
Most of the function implementation and test code are translated from the Python version.
Pull Request resolved: https://github.com/pytorch/pytorch/pull/33652
Differential Revision: D20052211
Pulled By: yf225
fbshipit-source-id: ce6767db54364f91ef4f06674239a12278c2752a
Summary:
The original design of `torch::nn::utils::clip_grad_norm_` / `clip_grad_value_` takes input by non-const reference, which prevents users from passing rvalue reference as input into the functions. This PR changes the functions to take input by value, which matches the Python version's semantics, and also adheres to the C++ API convention that if a function modifies its input in-place, it should take that input by value.
Pull Request resolved: https://github.com/pytorch/pytorch/pull/30216
Differential Revision: D18632543
Pulled By: yf225
fbshipit-source-id: 97a09d6467f982fe9c8120f483a9c07fcf13699e
Summary:
Adds C++ API clip_grad_value_ for torch::nn:utils module.
Also, fix the for indent level error in the original test/test_nn.py.
Issue: https://github.com/pytorch/pytorch/issues/25883
Reviewer: yf225
Pull Request resolved: https://github.com/pytorch/pytorch/pull/28736
Differential Revision: D18263807
Pulled By: yf225
fbshipit-source-id: 29282450bd2099df16925e1d0edd3d933f6eeb9b
Summary:
Pull Request resolved: https://github.com/pytorch/pytorch/pull/26140
Per https://github.com/pytorch/pytorch/issues/25883, we want to work
towards C++/Python API parity. This diff adds clip_grad_norm_ to the c++ API to
improve parity.
ghstack-source-id: 91334333
ghstack-source-id: 91334333
Test Plan: Added a unit test
Differential Revision: D17312367
fbshipit-source-id: 753ba3a4d084d01f3cc8919da3108e67c809ad65
